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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK25_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSCFKSSVS LFSVFLFMIL KTVTSDPTYL YHICPNTTTY SRNSSYLTNL RTVLSSLSSP  60
   61 NAAYASLFDN AAAGEENDSN RVYGVFLCRG DVSAEICRDC VAFAANETLQ RCPREKVAVI 120
  121 WYDECMVRYS NQSIVGQMRI RPGVFLTNKQ NITENQVSRF NESLPALLID VAVKAALSSR 180
  181 KFATEKANFT VFQTIYSLVQ CTPDLTNQDC ESCLRQVINY LPRCCDRSVG GRVIAPSCSF 240
  241 RYELYPFYNE TIAAAPMAPP PSSTVTAPPL NIPSEKGKGK NLTVIVTAIA VPVSVCVLLL 300
  301 GAMCWLLARR RNNKLSAETE DLDEDGITST ETLQFQFSAI EAATNKFSES NKLGHGGFGE 360
  361 VYKGQLITGE TVAIKRLSQG STQGAEEFKN EVDVVAKLQH RNLAKLLGYC LDGEEKILVY 420
  421 EFVPNKSLDY FLFDNEKRRV LDWQRRYKII EGIARGILYL HRDSRLTIIH RDLKASNILL 480
  481 DADMHPKISD FGMARIFGVD QTQANTKRIV GTYGYMSPEY AIHGKYSVKS DVYSFGVLVL 540
  541 ELITGKKNSS FYEEDGLGDL VTYVWKLWVE NSPLELVDEA MRGNFQTNEV IRCIHIALLC 600
  601 VQEDSSERPS MDDILVMMNS FTVTLPIPKR SGFLLRTMKD SRDPRSGGSA SDHSATSKSL 660
  661 PLSVDDSSIT IVYPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle