YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7378609, gi\|9...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANLARRLI GNRSTQILGA VNSSSGAASS VARAFCSSTT PITATLFPGD GIGPEIAESV  60
   61 KKVFTTAGVP IEWEEHYVGT EIDPRTQSFL TWESLESVRR NKVGLKGPMA TPIGKGHRSL 120
  121 NLTLRKELNL YANVRPCYSL PGYKTRYDDV DLITIRENTE GEYSGLEHQV VRGVVESLKI 180
  181 ITRQASLRVA EYAFLYAKTH GRERVSAIHK ANIMQKTDGL FLKCCREVAE KYPEITYEEV 240
  241 VIDNCCMMLV KNPALFDVLV MPNLYGDIIS DLCAGLVGGL GLTPSCNIGE DGVALAEAVH 300
  301 GSAPDIAGKN LANPTALLLS GVMMLRHLKF NEQAEQIHSA IINTIAEGKY RTADLGGSST 360
  361 TTEFTKAICD HL

Type	Start	End	Confidence
Signal Peptide	1	34	0.79
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	372	0.99