YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15240873, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.54
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGFSLSLM FLLVSHFFVS GVMSRNFTIE NKCDYTVWPG FLTMTTAVSL PTNGFSLKKG  60
   61 ESRVINVPPS WSGRLWGRSF CSTSSTGNFS CATGDCGSGK IECSDSGARP PTTLIDFTLD 120
  121 ATDGQDFYDV SVVDGYNLPL VVVPQRLGSG RTCSNVGCVV NLNKTCPSEL KVMGSSNKEH 180
  181 PIACMNACQK FGLPEFCCYG EYGKPAKCQP TLYSTNFKNE CPLAYSYAYD NENNTFRCSN 240
  241 SPNYVITFCP NDISSMSQPS KETNGGTKQK SSWKLKLIVG VSAALTLMIL IVVVIIVRTK 300
  301 NMRNSEWNDQ NVEAVAMLKR YSYTRVKKMT NSFAHVLGKG GFGTVYKGKL ADSGRDVAVK 360
  361 ILKVSEGNGE EFINEVASMS RTSHVNIVSL LGFCYEKNKR AIIYEFMPNG SLDKYISANM 420
  421 STKMEWERLY DVAVGISRGL EYLHNRCVTR IVHFDIKPQN ILMDENLCPK ISDFGLAKLC 480
  481 KNKESIISML HMRGTFGYIA PEMFSKNFGA VSHKSDVYSY GMVVLEMIGA KNIEKVEYSG 540
  541 SNNGSMYFPE WVYKDFEKGE ITRIFGDSIT DEEEKIAKKL VLVALWCIQM NPSDRPPMIK 600
  601 VIEMLEGNLE ALQVPPNPLL FSPEETVPDT LEDSDDTSTF FNPSHFERGT LLDSEDVLQH 660
  661 GSRSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle