YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8777348, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRFLCCLKG GSSSNAAQGN DENDEVDVER LFGNNERLNH LWRNHLRLPD DREVADPTAA  60
   61 LLPVSPPLPD NCGESFLWRE LVNGTINFRD EFYLGKGNFG EVHRCYFSRL NVDGAVKVQN 120
  121 PQNPTGHVEF LAEVTTLRAT NHPNVIRLLG NCYGQRNRAI IYEFMANGDL ERHIFAHKTM 180
  181 VEGPRPKGLT LPIRVLDWYT RMKIAVGVAK GLVYLHEELK VINRDVKAGN ILLDADFVPK 240
  241 LTDFGLATKI VEDENGVEQQ QRIIPMKASM GYIAPEGEIS WLVSTKTDVY SYGAFLLVLF 300
  301 TGRKPFYSDN PAGKKNLTDW FLRVWDRIED APVKADVALG NRYSVEGLKK IFDTARMCIK 360
  361 AERLERPTMS EVEAMVLEAA AFPVQVPRQV TRRRSAST

Type	Start	End	Confidence
Signal Peptide	1	16	0.91
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	398	0.99