YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Y2992_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAYTHPMER ELSGLSSRGN SELGSRYSIE SGCYMTSLAA SIFIASLVTF GVLMITLLIA  60
   61 LSTMLQSCEN RNIAIVEAQR LDESFGYCKI LSLHSQLNSL DEESELPLLC RDVALHRIKQ 120
  121 GIYLRELNFT IQMALTYFQT IKPMNDNCDV VVIDIDDTNL LEQDSYYMKY IEEAKHQKSI 180
  181 LILALYSKLR SQGYSMVLLS RRPETERNAT IEQLKSRGYS DWSHLIMSRE DTRQKEELER 240
  241 GHRVIGVIGN HMDVLRGQWN WQSKRLFKLP SLTYDDVLDY NER

Type	Start	End	Confidence
Cytoplasmic	1	37	0.78
Transmembrane Helix	38	61	0.88
Non-Cytoplasmic	62	283	0.83