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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHG_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRVSFEVKD TEAEKSSSEI LSGSLPSTYR NPAMENVGNA VDDGSSVKNN PKLDMQKQNG  60
   61 LVKWFKKCLT MVSGESKAPR LDRSKSTAGQ ALKGLKIISK TDGNAAWTVV EKRYLKITAN 120
  121 TDGLLLRSKF GECIGMNSKE FALELFDALA RKSHLKGDVI TETELKKFWE QINDKSFDSR 180
  181 LITFFDLMDK DSDGRLTEDE VREIIKLSSS ANHLSCIQNK ADEYAAMIME ELDPDHMGYI 240
  241 MMESLKKLLL QAETKSVSTD INSEERKELS DMLTESLKPT RDPNHLRRWY CQLRFFVLDS 300
  301 WQRVWVIALW LTIMAILFAY KYIQYKNRAV YEVLGPCVCL AKGAAETLKL NMALILLPVC 360
  361 RNTITWLRNK TRLGVFVPFD DNLNFHKVIA VGIAIGVAIH SVSHLACDFP LLIAATPAEY 420
  421 MPLGKFFGEE QPKRYLHFVK STEGITGLVM VFLMVIAFTL AMPWFRRGKL EKKLPGPLKK 480
  481 LASFNAFWYT HHLFVIVYIL LVLHGYYIYL NKEWYKKTTW MYLAVPVALY AYERLIRAFR 540
  541 SSIRTVKVLK MAAYPGKVLT LQMSKPTNFK YMSGQYMFVN CPAVSPFEWH PFSITSTPQD 600
  601 DYLSVHIKAL GDWTEAIQGV FSESREKIVE KHHVIFQVSK PPPVGDMLNG ANSPRFPKIM 660
  661 IDGPYGAPAQ DYKKYEVVLL IGLGIGATPM ISIIKDIINN TETKEQLSQM EKGSPQEQQG 720
  721 NKETFKTRRA YFYWVTKEQG TFDWFKNIMN EIAERDKSKV IELHNHCTSV YEEGDVRSAL 780
  781 IRMLQSLNYA KNGLDIVAGT RVMSHFARPN WKNVYKQIAM DHPGANVGVF YCGAPVLTKE 840
  841 LRQLALEFTH KTSTRFSFHK ENF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle