YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2275212, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPYKAIILI GVTVCCYTFS GVSNVHATGR SVEETSQVPA SSPDPSLIEP PVSSISVVPA  60
   61 SAPSPTSEDI NTGSNLAPTA AVSAPGPSQE DIDINFDSVT NIADLAPKFE HINKFDFSSM 120
  121 KIDTTAKDLC KNTDYNNECI AAILPDLQKQ AEGEGGDGGI APKDVMRMEA ESLLKKANAT 180
  181 LDYAKRVVED RKTPMPVKEA MSVCVENYDS LISGLEDAKM AMEEGDYGRL DSVLSAAISD 240
  241 VSTCSDNFVD IPDVDSPTAS LDDLMKKLCS NVLAMSQKVQ NR

Type	Start	End	Confidence
Signal Peptide	1	27	0.66
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	282	0.99