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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BZP17_ARATH
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPITKEQP PPPAPDPNST YPPPSDFDSI SIPPLDDHFS DQTPIGELMS DLGFPDGEFE  60
   61 LTFDGMDDLY FPAENESFLI PINTSNQEQF GDFTPESESS GISGDCIVPK DADKTITTSG 120
  121 CINRESPRDS DDRCSGADHN LDLPTPLSSQ GSGNCGSDVS EATNESSPKS RNVAVDQKVK 180
  181 VEEAATTTTS ITKRKKEIDE DLTDESRNSK YRRSGEDADA SAVTGEEDEK KRARLMRNRE 240
  241 SAQLSRQRKK HYVEELEEKV RNMHSTITDL NGKISYFMAE NATLRQQLGG NGMCPPHLPP 300
  301 PPMGMYPPMA PMPYPWMPCP PYMVKQQGSQ VPLIPIPRLK PQNTLGTSKA KKSESKKSEA 360
  361 KTKKVASISF LGLLFCLFLF GALAPIVNVN YGGISGAFYG NYRSNYITDQ IYSQHRDRVL 420
  421 DTSRSGAGTG VSNSNGMHRG RDSDRGARKN ISATESSVTP GNGSEPLVAS LFVPRNDKLV 480
  481 KIDGNLIINS ILASEKAVAS RKASESKERK ADLMISKDYT PALPLPDVGR TEELAKHLYR 540
  541 SKAEKQKALS SGSADTLKDQ VKTKAANGEM QQWFREGVAG PMFSSGMCTE VFQFDVSSTS 600
  601 GAIIPAATNV SAEHGKNTTD THKQQNRRIL RGLPIPLPGS DFNLTKEHQR NSSSKEIKPA 660
  661 SSMVVSVLVD PREGGDGDID GMIGGPKSLS RVFVVVLLDS AKYVTYSCVL PRSGAPHLVT 720
  721 T

YRC Informatics Platform - Version 3.0
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