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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22796166, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLRLSPLK LGSFKSSLSG RSTPRGSPTL RKVHSGRTPR REGKGSGGAV QWFRSNRLLY  60
   61 WLLLITLWTY LGFYVQSRWA HDDDNKVEFL RFGGKLREDV LHVEQNKRRD LVADESSHAV 120
  121 VDHTNIVHLG VNKRMHVTLA KKEDSTSRRS VSPRRRTRKA SRSSRTRIRS TQKVRKVMET 180
  181 KELDEQDQEL PNINVTYGKL FGPFGSLEDR ILEWSPQKRS GTCDRKSDFK RLVWSRRFVL 240
  241 LFHELSMTGA PISMMELASE LLSCGATVYA VVLSRRGGLL QELTRRRIKV VEDKGELSFK 300
  301 TAMKADLVIA GSAVCASWID QYMDHHPAGG SQIAWWVMEN RREYFDRAKP VLDRVKLLIF 360
  361 LSEVQSKQWL TWCEEDHVKL RSQPVIVPLS VNDELAFVAG VSSSLNTPTL TQETMKEKRQ 420
  421 KLRESVRTEF GLTDKDMLVM SLSSINPGKG QLLLLESVAL ALEREQTQEQ VAKRNQSKII 480
  481 KNLNGIRKEK ISLSARHRLR GSSRKMKITS PAVDNHPSVL SATGRRKLLL SGNVTQKQDL 540
  541 KLLLGSVGSK SNKVAYVKEM LSFLSNNGNL SNSVLWTPAT TRVASLYSAA DVYVTNSQGV 600
  601 GETFGRVTIE AMAYGLPVLG TDAGGTKEIV EHNVTGLLHP VGRAGNKVLA QNLLFLLRNP 660
  661 STRLQLGSQG REIVEKMYMK QHMYKRFVDV LVKCMRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle