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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK26_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLLLPLIS LLFQIQCFTV KSQPVPLNQI CSNVTGNFTV NTPYAVNLDR LISSLSSLRR  60
   61 NVNGFYNISV GDSDEKVNSI SQCRGDVKLE VCINCIAMAG KRLVTLCPVQ KEAIIWYDKC 120
  121 TFRYSNRTIF NRLEISPHTS ITGTRNFTGD RDSWEKSLRG LLEGLKNRAS VIGRSKKNFV 180
  181 VGETSGPSFQ TLFGLVQCTP DISEEDCSYC LSQGIAKIPS CCDMKMGSYV MSPSCMLAYA 240
  241 PWRFYDPVDT DDPSSVPATP SRPPKNETRS VTQGDKNRGV PKALIFASAS VAIVVLFIVL 300
  301 LVVFLKLRRK ENIRNSENKH ENENISTDSM KFDFSVLQDA TSHFSLENKL GEGGFGAVYK 360
  361 GVLSDGQKIA VKRLSKNAQQ GETEFKNEFL LVAKLQHRNL VKLLGYSIEG TERLLVYEFL 420
  421 PHTSLDKFIF DPIQGNELEW EIRYKIIGGV ARGLLYLHQD SRLRIIHRDL KASNILLDEE 480
  481 MTPKIADFGM ARLFDIDHTT QRYTNRIVGT FGYMAPEYVM HGQFSFKTDV YSFGVLVLEI 540
  541 ISGKKNSGFS SEDSMGDLIS FAWRNWKEGV ALNLVDKILM TMSSYSSNMI MRCINIGLLC 600
  601 VQEKVAERPS MASVVLMLDG HTIALSEPSK PAFFSHSNAV SDSSSSLGHN AKTSNYNSNT 660
  661 ELYPR

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