YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TI232_ARATH
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANNRSDHG SDENTRLYNP YQNYEVPINK SQYLYKLPTS PEFLFTEEAL RQRRSWGENL  60
   61 TFYTGTAYLG GSVAGASVGV ITGVKSFESG DTTKLKINRI LNSSGQTGRT WGNRIGIIGL 120
  121 VYAGIESGIV AATDRDDVWT SVVAGLGTGA VCRAARGVRS AAVAGALGGL AAGAVVAGKQ 180
  181 IVKRYVPI

Type	Start	End	Confidence
Cytoplasmic	1	59	0.82
Transmembrane Helix	60	82	0.70
Non-Cytoplasmic	83	160	0.48
Transmembrane Helix	161	182	0.74
Cytoplasmic	183	188	0.56