YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL33_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNNTTTSFG SGPGIVVVPT PATTVPTTDF PGTTITSNST FIIIGPPPPF PAPPRSIDLT  60
   61 PLKLIFVVIA FVAVPALVYA LFFNGPCSSS RRNSSSSRTS SSSDDTPHAT VDTPPITETT 120
  121 VTSESGGKFH KDTHSKEIGN ECSVCLMVFT DSDELRQLSE CKHAFHVLCI ETWLKDHPNC 180
  181 PICRTDVSVK QQTEAPNVPV NVNGNVNRSG GNRRVSATSR DDDWRQGLPD ASSLV

Type	Start	End	Confidence
Cytoplasmic	1	63	0.80
Transmembrane Helix	64	83	0.96
Non-Cytoplasmic	84	235	0.87