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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CESA5_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTGGRLIAG SHNRNEFVLI NADESARIRS VEELSGQTCQ ICGDEIELSV DGESFVACNE  60
   61 CAFPVCRPCY EYERREGNQS CPQCKTRYKR IKGSPRVEGD EEDDGIDDLD FEFDYSRSGL 120
  121 ESETFSRRNS EFDLASAPPG SQIPLLTYGE EDVEISSDSH ALIVSPSPGH IHRVHQPHFP 180
  181 DPAAHPRPMV PQKDLAVYGY GSVAWKDRME EWKRKQNEKY QVVKHDGDSS LGDGDDADIP 240
  241 MMDEGRQPLS RKVPIKSSKI NPYRMLIVLR LVILGLFFHY RILHPVNDAY ALWLISVICE 300
  301 IWFAVSWVLD QFPKWYPIER ETYLDRLSLR YEKEGKPSEL AGVDVFVSTV DPMKEPPLIT 360
  361 ANTVLSILAV DYPVDRVACY VSDDGAAMLT FEALSETAEF ARKWVPFCKK YTIEPRAPEW 420
  421 YFCHKMDYLK NKVHPAFVRE RRAMKRDYEE FKVKINALVA TAQKVPEEGW TMQDGTPWPG 480
  481 NNVRDHPGMI QVFLGNNGVR DVENNELPRL VYVSREKRPG FDHHKKAGAM NSLIRVSGVL 540
  541 SNAPYLLNVD CDHYINNSKA LREAMCFMMD PQSGKKICYV QFPQRFDGID KSDRYSNRNV 600
  601 VFFDINMKGL DGLQGPIYVG TGCVFRRQAL YGFDAPKKKK TKRMTCNCWP KWCLFCCGLR 660
  661 KNRKSKTTDK KKKNREASKQ IHALENIEEG TKGTNDAAKS PEAAQLKLEK KFGQSPVFVA 720
  721 SAGMENGGLA RNASPASLLR EAIQVISCGY EDKTEWGKEI GWIYGSVTED ILTGFKMHSH 780
  781 GWRSVYCTPK IPAFKGSAPI NLSDRLHQVL RWALGSVEIF LSRHCPIWYG YGGGLKWLER 840
  841 LSYINSVVYP WTSIPLLVYC SLPAICLLTG KFIVPEISNY ASILFMALFG SIAVTGILEM 900
  901 QWGKVGIDDW WRNEQFWVIG GVSAHLFALF QGLLKVLAGV ETNFTVTSKA ADDGEFSELY 960
  961 IFKWTSLLIP PTTLLIINVI GVIVGISDAI SNGYDSWGPL FGRLFFAFWV ILHLYPFLKG1020
 1021 LLGKQDRMPT IILVWSILLA SILTLLWVRV NPFVAKGGPI LEICGLDCL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle