YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DDPS5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLFSVVFT FLALFLIPGL FISRRLNVPL SLTNILRFIK IIASKYDDEE ERNEKRGTMG  60
   61 EKQKRGRNIM PKHVAVILDG NRRWAEKRGL GTSEGHEAGA RRLMENAKDC FAMGTNTISL 120
  121 FAFSTENWER PEDEVKCLMA LFEKYLASDM PYLRSDKIKI SVIGNRTKLP ESLLGLIEEV 180
  181 EEATKSYEGK NLIIAIDYSG RYDILQACKS LANKVKDGLI QVEDINEKAM EKELLTKCSE 240
  241 FPNPDLLIRT SGEQRISNFF LWQSAYTELY FPTVLWPDFG EAEYLEALTW YQQRQRRFGR 300
  301 RV

Type	Start	End	Confidence
Signal Peptide	1	23	0.79
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	302	0.94