YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PHB3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSQQAAVSF LSNLAKAAFG LGTAATVLNT SLFTVDGGER AVIFDRFRGV MDQTVGEGTH  60
   61 FLIPILQRPH IFDIRTKPHT FSSISGTKDL QMVNLTLRVL SRPEVSRLPY IFQTLGLEYD 120
  121 EKVLPSIGNE VLKAVVAQFN ADQLLTERPH VSALVRESLI TRAKDFNIVL DDVAITHLSY 180
  181 GVEFSRAVEQ KQVAQQEAER SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL 240
  241 IELRRIEASR EIASTLARSP NVAYLPGGQS MLFALNR

Type	Start	End	Confidence
Signal Peptide	1	17	0.85
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	277	0.97