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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20465503, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLKLFLLLS LVSFSHSDSS STVSCPNGTD FHQLTTVFRY VSGFNSSWFS SNCSAVITHV  60
   61 VLPSRKLNGT VSWNPIRNLT RLRVLDLSNN SLDGSLPTWL WSMPGLVSVN LSRNRFGGSI 120
  121 RVIPVNGSVL SAVKELNLSF NRFKHAVNFT GFTNLTTLDL SHNSLGVLPL GLGSLSGLRH 180
  181 LDISRCKING SVKPISGLKS LDYLDLSENS MNGSFPVDFP NLNHLQFLNL SANRFSGSVG 240
  241 FDKYRKFGKS AFLHGGDFVF NDSKIPYHHR IHRLPHRHPP PVRQRNVKTH RTNHTPLVIG 300
  301 LSSSLGALII VIFAAAIILI RRRMKSARTK SRWAISNPTP LDFKMEKSGP FEFGTESGSS 360
  361 WVADIKEPTA APVVMASKPL MNLTFKDLIV ATSHFGTESV ISDGTCGPLY RAVLPGDLHV 420
  421 AIKVLERIRD VDQNDAVTAF EALTRLKHPN LLTLSGYCIA GKEKLILYEF MANGDLHRWL 480
  481 HELPAGETNV EDWSADTWES HVGDSSPEKT NWLIRHRIAI GVARGLAYLH HVGTTHGHLV 540
  541 ATNILLTETL EPRISDFGIN NIARTGDDTN KNNVEFDVYS FGVILFELLT GKQGSDENVK 600
  601 SVRRLVKERR GEEALDSRLR LAAGESVNEM VESLRIGYFC TAETPVKRPT MQQVLGLLKD 660
  661 IRTVSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle