YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TR164_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLVFSLNL PSSHGFNLSP RNLQSFFVTQ TGAPRFRAVR CKPNPESSET KQEKLVIDNG  60
   61 ETSSASKEVE SSSSVADSSS SSSSGFPESP NKDINRRVAA VTVIAALSLF VSTRLDFGIS 120
  121 LKDLTASALP YEEALSNGKP TVVEFYADWC EVCRELAPDV YKIEQQYKDK VNFVMLNVDN 180
  181 TKWEQELDEF GVEGIPHFAF LDREGNEEGN VVGRLPRQYL VENVNALAAG KQSIPYARAV 240
  241 GQYSSSESRK VHQVTDPLSH G

Type	Start	End	Confidence
Signal Peptide	1	15	0.71
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	261	0.98