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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SYHM_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAIHIVTTR LSSSFRPILL LDLVSSCSPP RQFSIPRRLI CAAANGGGRS GSIVAPLVTE  60
   61 EDFHKKIDVN PPKGTRDFPP EDMRLRNWLF NHFKEVSRLY GYEEVDYPVL ETEALFIRKA 120
  121 GEEIRDQLYC FEDRGNRRVA LRPELTPSLA RLVIQKGKSV SLPLKWFAIG QCWRYERMTR 180
  181 GRRREHYQWN MDIIGVPQVT AEAELISSIV TFFKRIGITA SDVGFKVSSR KVLQELLKKY 240
  241 GVPEDLFGRV CIIIDKIEKI PIDEIKKELG FTGISEDAIE QLLQVLSVKS LDDLEDIIGG 300
  301 AGEAIADLKQ LFSLAEKFGY SEWIQFDASV VRGLAYYTGI VFEGFDRKGK LRAICGGGRY 360
  361 DRLLSTYGGD DFPACGFGFG DAVIVELLKE KDLLPELGQE VENIVCALDK DLQGAAATVA 420
  421 TALRDKGQTV DLVLESKPLK WVFKRAARVN ARRLVLVGKT EWEDGSVSVK VLSSGEQFQV 480
  481 KLSDLE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle