YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2829876, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLIRGSTRL LQRHRFSISN TLPFTSSSCG SWSANESRKL GFDSFPSTRA ATYLISSLKN  60
   61 AGFSSLAVVP KQNFSSRCFS TTGDSVQGSP ESDCVVPQRI KFKRLDKTAK HIMQIVDKEA 120
  121 VEEVRTLREI PEIKPGYIVQ LKVEVPENKR RVSIVKGVVI ARRNAGLNST FRIRRLVAGV 180
  181 GVESMFPLYS PNLRVIKVVD KKKVRRAKLY YLREKVNALK KH

Type	Start	End	Confidence
Signal Peptide	1	33	0.60
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	222	0.98