YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CP31B_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSVLTPSL KLLAMTNSSS STLFCIPSIF NISSSESHRF NFSLSSRPVN LTLSLKSKTL  60
   61 RNSSPVVTFV SQTSNWAEEE EGEDGSIGGT SVTVDESFES EDGVGFPEPP EEAKLFVGNL 120
  121 PYDVDSQALA MLFEQAGTVE ISEVIYNRDT DQSRGFGFVT MSTVEEAEKA VEKFNSFEVN 180
  181 GRRLTVNRAA PRGSRPERQP RVYDAAFRIY VGNLPWDVDS GRLERLFSEH GKVVDARVVS 240
  241 DRETGRSRGF GFVQMSNENE VNVAIAALDG QNLEGRAIKV NVAEERTRR

Type	Start	End	Confidence
Signal Peptide	1	21	0.66
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	289	0.97