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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT48_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRASFCLL SCLIILFLSS VSAIIYDPQD KQVYVVYMGS LPSQPNYTPM SNHINILQEV  60
   61 TGESSIEGRL VRSYKRSFNG FSALLTESER EGVAEMEGVV SVFRSKNYKL QTTASWDFMG 120
  121 MKEGKNTKRN FAVESDTIIG FIDSGIWPES ESFSDKGFGP PPKKWKGVCK GGKNFTCNNK 180
  181 LIGARDYTSE GTRDLQGHGT HTTSTAAGNA VADTSFFGIG NGTARGGVPA SRVAAYKVCT 240
  241 ITGCSDDNVL SAFDDAIADG VDLISVSLGG DYPSLYAEDT IAIGAFHAMA KGILTVHSAG 300
  301 NAGPNPTTVV SVAPWMLTVA ATTTNRRFLT KVVLGNGKTL VGKSVNAFDL KGKKYPLEYG 360
  361 DYLNESLVKG KILVSRYLSG SEVAVSFITT DNKDYASISS RPLSVLSQDD FDSLVSYINS 420
  421 TRSPQGSVLK TEAIFNQLSP KVASFSSRGP NTIAVDILKP DISAPGVEIL AAYSPLSLPS 480
  481 EDRRDKRRVK YSVLSGTSMA CPHVTGVAAY IKTFHPDWSP SVIQSAIMTT AWQMNATGTG 540
  541 AESTEFAYGA GHVDPIAAIN PGLVYELNKT DHISFLCGMN YTSKTLKLIS GDAVICSGKT 600
  601 LQRNLNYPSM SAKLSESNSS FTVTFKRTVT NLGTANSTYK SKIVLNHGSK LNVKVSPSVL 660
  661 SMKSLKEKQS FTVTVSGSNI DPKLPSSANL IWSDGTHNVR SPIVVYIDGY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle