YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ACR12_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSSSIFSV TQFSSSLASR PSSAISRQTR FPAQIASPDL SPALFDDRRK FVGGVMSLLT  60
   61 KSIKNRVYAS INSIDSAATP SYPKSEDDDD VVPMPMVMID QDADPEATIV QLSFGNRLGA 120
  121 LIDTMRALKD LGLDVIKGTV STEGSIKQTK FSITKRDTGR KVEDPDLLEQ IRLTIINNLL 180
  181 KYHPECSEQL AMGETFGIKA PEKKIDVDIA THIHVKEDGP KRSLLVIETA DRPGLVVEMI 240
  241 KVMADVNIDV ESAEIDTEGL VAKDKFHVSY QGQALNRSLS QVLVNCLRYF LRRPETDIDS 300
  301 Y

Type	Start	End	Confidence
Signal Peptide	1	24	0.89
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	301	0.99