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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15233659, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISGDTLSAK KPKSVPQEED QDPPSQSIAL LDNHTDSSGS DSSTRSISSC FIFTSLLLVT  60
   61 CIALSAASAF AFLFFSSQKP VLSLNQISKS PAFDRSVARP LKKLDKPVVL LISSDGFRFG 120
  121 YQFKTKLPSI HRLIANGTEA ETGLIPVFPT LTFPNHYSIV TGLYPAYHGI INNHFVDPET 180
  181 GNVFTMASHE PEWWLGEPLW ETVVNQGLKA ATYFWPGSEV HKGSWNCPQG LCQNYNGSVP 240
  241 FDDRVDTILS YFDLPSNEIP SFMTLYFEDP DHQGHQVGPD DPQITEAVVN IDRLIGRLID 300
  301 GLEKRGIFED VTMIMVGDHG MVGTCDKKLV VLDDLAPWIK IPSSWVQYYT PLLAIQPPSG 360
  361 HDAADIVAKI NEGLSSGKVE NGKYLKVYLK EDLPSRLHYV DSDRIPPIIG LVDEGFKVEQ 420
  421 KKSKAKECGG AHGYDNAFFS MRTIFIGHGP MFSKGRKVPS FENVQIYNVI SSILGLKAAP 480
  481 NNGSDEFSSS ILLPRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle