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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB27G_ARATH
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTSSSSSGL VKAKSETLAE ALKSSSLDFS NGDGSSHGSK QHVRARTLSS PSYSSNSKNR  60
   61 WNTHIRKAKS AHPALDLAGL TGGAALSRAS SASLGLSFSF TGFTVPHEEI IASERCSNDD 120
  121 ILEDIEAATS SVVKFQAEPT FPIYLKFIDI TYKVTTKGMT SSSEKSILNG ISGSAYPGEL 180
  181 LALMGPSGSG KTTLLNALGG RFNQQNIGGS VSYNDKPYSK HLKTRIGFVT QDDVLFPHLT 240
  241 VKETLTYTAL LRLPKTLTEQ EKEQRAASVI QELGLERCQD TMIGGSFVRG VSGGERKRVC 300
  301 IGNEIMTNPS LLLLDEPTSS LDSTTALKIV QMLHCIAKAG KTIVTTIHQP SSRLFHRFDK 360
  361 LVVLSRGSLL YFGKASEAMS YFSSIGCSPL LAMNPAEFLL DLVNGNMNDI SVPSALKEKM 420
  421 KIIRLELYVR NVKCDVETQY LEEAYKTQIA VMEKMKLMAP VPLDEEVKLM ITCPKREWGL 480
  481 SWWEQYCLLS LRGIKERRHD YFSWLRVTQV LSTAIILGLL WWQSDITSQR PTRSGLLFFI 540
  541 AVFWGFFPVF TAIFTFPQER AMLSKERESN MYRLSAYFVA RTTSDLPLDL ILPVLFLVVV 600
  601 YFMAGLRLRA ESFFLSVLTV FLCIVAAQGL GLAIGASLMD LKKATTLASV TVMTFMLAGG 660
  661 YFVKKVPFFI AWIRFMSFNY HTYKLLVKVQ YEEIMESVNG EEIESGLKEV SALVAMIIGY 720
  721 RLVAYFSLRR MKLHSST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle