YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7486915, gi\|3...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLGIITLT NSAAVVTPSL LSSTAAFPGT LTLPSPLLSD RLTNSILFHE SRSLSFSCFS  60
   61 SSSSSSAAYL PSLEEYPSAK GSVKRDDNQK VVLKGMTYAS LQEWVQSHGF RPGQALMLWK 120
  121 RLYKDNIWAN NVDELEGLNK DLKRMISEHA EFGALSFKDI RSASDGTRKI LFTLDDGLVI 180
  181 ETVVIPCDRG RTTVCVSSQV GCAMNCQFCY TGRMGLKRNL TTAEIVEQAV YARRLLSHEV 240
  241 GSITNVVFMG MGEPFHNIDN VIKAANIMVD ENGLHFSPRK VTVSTSGLVP QLKRFLRESN 300
  301 CALAVSLNAT TDEVRNWIMP INRKYKLSLL LETLREGLSS RHKYKVLFEY VMLAGVNDSM 360
  361 DDARRLVELV QGIPCKINLI QFNPHSGSQF IQTEEDKMIK FRNVLAEGGC TVLMRFSRGN 420
  421 DQMAACGQLG MIGAVQAPVM RVPEQFRTAL KASV

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	454	0.99