YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PB27A_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASASATATL LKPNLPPHKP TIIASSVSPP LPPPRRNHLL RRDFLSLAAT STLLTQSIQF  60
   61 LAPAPVSAAE DEEYIKDTSA VISKVRSTLS MQKTDPNVAD AVAELREASN SWVAKYRKEK 120
  121 ALLGKASFRD IYSALNAVSG HYVSFGPTAP IPAKRKARIL EEMETAEKAL TRGR

Type	Start	End	Confidence
Signal Peptide	1	68	0.61
N-region	1	59
H-region	60	65
C-region	66	68
Cleavage Site	68	69
Non-Cytoplasmic	69	174	0.99