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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PAP85_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITNKLIIT LLLLISIAVV HCLSFRVEID EFEPPQQGEQ EGPRRRPGGG SGEGWEEEST  60
   61 NHPYHFRKRS FSDWFQSKEG FVRVLPKFTK HAPALFRGIE NYRFSLVEME PTTFFVPHHL 120
  121 DADAVFIVLQ GKGVIEFVTD KTKESFHITK GDVVRIPSGV TNFITNTNQT VPLRLAQITV 180
  181 PVNNPGNYKD YFPAASQFQQ SYFNGFTKEV LSTSFNVPEE LLGRLVTRSK EIGQGIIRRI 240
  241 SPDQIKELAE HATSPSNKHK AKKEKEEDKD LRTLWTPFNL FAIDPIYSND FGHFHEAHPK 300
  301 NYNQLQDLHI AAAWANMTQG SLFLPHFNSK TTFVTFVENG CARFEMATPY KFQRGQQQWP 360
  361 GQGQEEEEDM SENVHKVVSR VCKGEVFIVP AGHPFTILSQ DQDFIAVGFG IYATNSKRTF 420
  421 LAGEENLLSN LNPAATRVTF GVGSKVAEKL FTSQNYSYFA PTSRSQQQIP EKHKPSFQSI 480
  481 LDFAGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle