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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|8778235
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNSKRKPEP TPFAGKKLRS TRLRRKRAQI SPVLVQSPLW SKQIGVSAAS VDSCSDLLAD  60
   61 DNVSCGSSRV EKSSNPKKTL IEEVEVSKPG YNVKETIGDS KFRRITRSYS KLHKEKEGDE 120
  121 IEVSESSCVD SNSGAGLRRL NVKGNKINDN DEISFSRSDV TFAGHVSNSR SLNFESENKE 180
  181 SDVVSVISGV EYCSKFGSVT GGADNEEIEI SKPSSFVEAD SSLGSAKELK PELEIVGCVS 240
  241 DLACSEKFSE EVSDSLDDES SEQRSEIYSQ YSDFDYSDYT PSIFFDSGSE FSEKSSSDSP 300
  301 ISHSRSLYLQ FKEQFCRSTI PNDFGSSCEE EIHSELLRFD DEEVEESYLR LRERERSHAY 360
  361 MRDCAKAYCS RMDNTGLIPR LRSIMVQWIV KPKEIYSLLW NLLRFMYQSA MIFFVADCLL 420
  421 PDYKQQCSDM GLQQETLFLG VGLLDRFLSK GSFKSERTLI LVGIASLTLA TRIEENQPYN 480
  481 SIRKRNFTIQ NLRYSRHEVV AMEWLVQEVL NFKCFTPTIF NFLWFYLKAA RANPEVERKA 540
  541 KSLAVTSLSD QTQLCFWPST VAAALVVLAC IEHNKISAYQ RVIKVHVRTT DNELPECVKV 600
  601 FSVTLSLYTN LIFTTKRKVS DCFHIFVPYT TESGLVAWAV SNQKEQKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle