YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7487980, gi\|5...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSKPGRSG FSGYILYKLS LTVLIVLSVA VTANGSDSPS SYVRRPQPPK KLNKPVVLLI  60
   61 SCDGFRFGYQ FKTETPNIDL LISRGTEAKT GLIPVFPTMT FPNHYSIATG LYPASHGIIM 120
  121 NKFTDPVSGE LFNRNLNPKW WLGEPLWVTA VNQGLMAATY FWPGADVHKG SWNCPKGFCK 180
  181 APYNVSVPLE ERVDTILNYF DLPEREIPDF MALYFDEPDI QGHEYGPDDP RVTEAVSKVD 240
  241 KMIGRIIMGL EKRKVFSDVH VILLGDHGMV TNCDKKVIYI DDLADWIKIP ADWIQDYSPV 300
  301 LAMNPRWGKD VKNPGQKNAE LVRKMNEALS SGKVANGEFL QVYLKENLPQ RLHYSDSSRI 360
  361 PPIIGMVGEG LMVKQNRTYV QECSGTHGYD NMFFSMRSIF VGYGPRFRRG IKVPSFENVQ 420
  421 VYNAVAEILG LRPAPNNGSS LFTRSLLLPF GETSQVE

Type	Start	End	Confidence
Signal Peptide	1	35	0.89
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	457	0.99