YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7488129, gi|7...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKEDNVERV TLLKQEVSKM LNETEGLLEQ LELIDTLQRL GVSYHFEQEI KKTLTNVHVK  60
   61 NVRAHKNRID RNRWGDLYAT ALEFRLLRQH DVFDGNIGVD LDDKDIKGIL SLYEASYLST 120
  121 RIDTKLKESI YYTTKRLRKF VEVNKNETKS YTLRRMVIHA LEMPYHRRVG RLEARWYIEV 180
  181 YGERHDMNPI LLELAKLDFN FVQAIHQDEL KSLSSWWSKT GLTKHLDFVR DRITEGYFSS 240
  241 VGVMYEPEFA YHRQMLTKVF MLITTIDDIY DIYGTLEELQ LFTTIVEKWD VNRLEELPNY 300
  301 MKLCFLCLVN EINQIGYFVL RDKGFNVIPY LKESWADMCT TFLKEAKWYK SGYKPNFEEY 360
  361 MQNGWISSSV PTILLHLFCL LSDQTLDILG SYNHSVVRSS ATILRLANDL ATSSVSHGFT 420
  421 TYNTEELARG DTMKSVQCHM HETGASEAES RAYIQGIIGV AWDDLNMEKK SCRLHQGFLE 480
  481 AAANLGRVAQ CVYQYGDGHG CPDKAKTVNH VRRQRIKWRN AFLLGSIMTT IVVLLHTPTF 540
  541 SVFSDEEETE SSSSSPIYLN GSLHLNIHIV SSEAKVENFH TLRTRTPIVQ LNASEASEAV 600
  601 LSRKRRKRKK RKKTKDDLIL TDPPPAPRHV LSSSERRALS LPPKKALTYA KLEIQRAPEV 660
  661 INDTDLFAPL FRNLSVFKRS YELMELILKV YIYPDGDKPI FHEPHLNGIY ASEGWFMKLM 720
  721 ESNKQFVTKN PERAHLFYMP YSVKQLQKKT TSTCSPSNTP SGTALMGQII SLSLATIGYR 780
  781 KCFYVKDQWG PYTVNEHPEL KRNAIKALCN ADLSDGIFVP GKDVSLPETS IRNAGRPLRN 840
  841 IGNGNRVSQR PILAFFAGNL HGRVRPKLLK HWRNKDEDMK IYGPLPHNVA RKMTYVQHMK 900
  901 SSKYCLCPMG YEVNSPRIVE AIYYECVPVV IADNFMLPFS DVLDWSAFSV VVPEKEIPRL 960
  961 KEILLEIPMR RYLKMQSNVK MVQRHFLWSP KPRKYDVFHM ILHSIWFNLL NQNQTSFDDH1020
 1021 IPDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle