YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P24DB_ARATH
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLLPSRYKI HKTKLRWILT MMTMMMMMVM RRGESMRLDM ESGNTKCISD DIKTNYMTVG  60
   61 TYSIVNPNEG HHLPPSHKLF VTVSSPKGKS HHHAENVESG KFVFTAEETG DYMTCFVAPG 120
  121 YRPTAKFAVD FEWKSGVEAK DWTTIAKRGQ ITMLEVEVRK LLDVTETIHE EMFQLIERER 180
  181 EMQELNRSTN SRMAALSLLS FVVTMSVAGL QLRHLKSFLE RKKLL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.78
Transmembrane Helix	13	30	0.76
Non-Cytoplasmic	31	192	0.92
Transmembrane Helix	193	215	0.86
Cytoplasmic	216	225	0.88