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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25371343, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKAVDGLTF PMSRVSESAS RLKTIISDML PRFTDDYSDD LSVRHLLLFI FIFLFVLETI  60
   61 LSLWELLVKY FSQSNSASGP KTDVDFGSND TLIKQGLSSR KYDDYDCKAA DGTNSMNEQL 120
  121 ISVTAPIDDI EAPVSPKVEK MKMSRQELID SPCTRARRRK KENWNSSGYS RKVLRSVIVS 180
  181 ATQQPCDRNP AKYEKSMNER SRTLKKRPYS PERELDSRFA PSGRAVSARY HDASLHQETE 240
  241 PHVSVWDRLG RASSECVLDT ESRTLSKFGI QTRETKVHQQ HGPVFPAAYS EQHSEIFQRE 300
  301 VLAVGYRHRV PQFDKDRKPK SETITSTEPH IAYNLSRKRR YGMVSPNSGE FSYVPQYKQA 360
  361 EQDFEKPSLL SHQSTKQDIF SEIKNVKEKM QELELRIIQS KQLKKQKVEE RKPSPQSGES 420
  421 QYQEDVSESR VIHVTNVYYA AKKEAISMFF SSKCGAVQNV IVVTDPVTRH PKGLCTNSLL 480
  481 SKKSSLSQKN LLFSSTAFVT FATKESVGKA VALSGTMFYS RPIKVRMHVI ASGVVSAAPQ 540
  541 IVTGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle