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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10177130, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKPGMSLLK GSLCVIVFLL LLSLVESVKG GGYVKYGTEA KVVPGKLNVH LVPHSHDDVG  60
   61 WLKTVDQYYV GSNNRIQNAC VRNVLDSVVD SLLRDPNRKF VFAEMAFFTR WWEEQSPERQ 120
  121 EQVRRLVKSG QLEFVNGGWA MNDEATCHYI DMIDQTTKGH RFIKQQFNTT PRAAWQIDPF 180
  181 GHSSVQAYLL GAELGLDSVH FARIDYQDRE KRKAEKSLEV IWRGSKTLDS SSQIFTNIFF 240
  241 VHYGPPTGFH YEVTDDYVPL QDNPRFDGYN IKEAVNDFVN ASLVYANVSR GNHVMWTMGD 300
  301 DFQYQFAESW FRQMDRLIHY VNKDGRVNAL YSTPSLYVDA KNVANVTWPL KTHDFFPYAD 360
  361 RAYAYWTGYF TSRPALKRYV RALSGYYMAA RQLEFLVGKN SGGPNTYSLG DALGIAQHHD 420
  421 AVTGTAKQHV TNDYMKRLAL GASEAEAVVN SALACLMNKA PKGGCTKPAI AFSQQCSLMN 480
  481 ISYCPSTEET LPGQKSLILV AYNSLGWNRT EIIRIPVNDA GLSVEDSSGN TLDAQYIPMD 540
  541 NVTSNLRSFY TKAYLGISSL QRPKYWLVFK AKVPPLGWNT FFISKASAQG SNNHKHSSVM 600
  601 LSPMNNTTEI GPGNLKMVFS SDSGRLERMY NSRTGADIKV DQNYFWYASN VGDAKDPQVS 660
  661 GAYIFRPNGS LAYPVSSSKI CTVTSAFIGN GNVQSKLQIV RGPLIDEVHQ QFSPWVAQVV 720
  721 RLYKEKEHAE FEFTIGPISV GKGHLTGKEI ITRMVTDMTT AKEFYTDSNG RDFLKRVRDN 780
  781 RTDWHLEVNE PIAGNYYPLN LGMYIKDEKA ELSVLVDRAT GGASIKDGEI ELMLHRRTSM 840
  841 DDSRGVEESL VETVCVNDTC AGLTIRGNYY VSINKVGEGG RWRRETGQEI YSPLLMAFAH 900
  901 ENKEKWKASN TVKGYAMDHL YTLPQNIALI TLEELDLGNV LLRLAHLYEA GEDSDYSKIA 960
  961 KVELKKLFSG KMIKEVTEMS LSANQEKVKM KEKMKWKVEG EAEQPSSPLR GGPVDKSTLV1020
 1021 VELGPMEIRT FVVQFYQKQR RRKLFVG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle