YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKAVLLPW LIPSPRHVSL FPVVQLPALE TAGWCVRKRR AEDVAVSVAF NPSGNFDISA  60
   61 FENDQDSDKV EPPMPPTTGR YEVVIDNDSI GRLDLSPFQR AIGITSPDDF GVAEPKRYLD 120
  121 RTIGFTINYK REDPGDPREL SEYPDVRLWF VRLDAMYPWL PLLLDWRAGE LARYAAMLVP 180
  181 HQMSLRMGVV FNPEALELFV MNKVFVVYPW LKRHGVPKPR LKTSDMARML GFGIGDELFD 240
  241 LIDHNE

Type	Start	End	Confidence
Signal Peptide	1	20	0.73
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	246	0.98