YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7340688, gi\|1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKSATLFLL FLTISAFTDG AQLIIVNNCQ ESIWPGILGG GGQITPRNGG FHMGSGEETI  60
   61 IDVPDKWSGR IWGRQGCTFN QNGKGSCQTG DCNDGSINCQ GTGGVPPATV VEMTLGSSSS 120
  121 PLHFYDVSLV DGFNLPVSMK PIGGGVGCGV AACEVNLNIC CPSALEVKRD GKVVGCKSAC 180
  181 LAMQSAKYCC TGEYANPQAC KPTLFANLFK AICPKAYSYA FDDSSSLNKC RASRYVITFC 240
  241 PPKSLNEKLR KFELKIESKF GHYTVVTILL TSVLKTQALA GGSKDIKDGF SAYS

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	294	0.99