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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TBR_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASDAVKYMP IHGGGTTATT AADIKSFFSA LKPKKTSTFA YAFVITFVSF TLFFAFSPSP  60
   61 NSSSPWFSNI FTSSSTTTTS DNTSGSQFSS IFSYILPNVT STKPTNRSSD ATDSLSVNAT 120
  121 SPPLNSNSKN GTLQTPAPET HTPVAKNTTF ESPIVNGTNP DAKNNTSSHP LLSDKSSTTG 180
  181 SNNQSRTTAD TETVNRNQTT SPAPSKAPVS VDLKTNSSSN SSTASSTPKK QTKTVDLVSS 240
  241 VKQEIEKWSE SLKNCEFFDG EWIKDDSYPL YKPGSCNLID EQFNCITNGR PDKDFQKLKW 300
  301 KPKKCSLPRL NGAILLEMLR GRRLVFVGDS LNRNMWESLV CILKGSVKDE TKVYEARGRH 360
  361 HFRGEAEYSF VFQDYNCTVE FFVSPFLVQE WEIVDKKGTK KETLRLDLVG KSSEQYKGAD 420
  421 VIVFNTGHWW THEKTSKGED YYQEGSNVYH ELAVLEAFRK ALTTWGRWVE KNVNPAKSLV 480
  481 FFRGYSASHF SGGQWNSGGA CDSETEPIKN DTYLTPYPSK MKVLEKVLRG MKTPVTYLNI 540
  541 TRLTDYRKDG HPSVYRKQSL SEKEKKSPLL YQDCSHWCLP GVPDSWNEIL YAELIVKLNQ 600
  601 LSQTQRKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle