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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5541675, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKPAVSYCL LSCIFALLVV SFASADKDDQ DKQEYIVYMG ALPARVDYMP MSHHTSILQD  60
   61 VTGESSIEDR LVRNYKRSFN GFAARLTKSE REILASMDEV VSVFPNKKLK LQTTTSWNFM 120
  121 GLKESKRTKR NTIIESDTII GVIDSGIYPE SDSFSGKGFG PPPKKWKGVC KGGKNFTWNN 180
  181 KLIGARYYTP KLEGFPESAR DYMGHGSHTA STAAGNAVKH VSFYGLGNGT ARGGVPAARI 240
  241 AVYKVCDPGV DGCTTDGILA AFDDAIADKV DIITISIGGD NSSPFEEDPI AIGAFHAMAK 300
  301 GILIVNSAGN SGPEPSTVAS IAPWMFTVAA SNTNRAFVTK VVLGNGKTVV GRSVNSFDLN 360
  361 GKKYPLVYGK SASSSCGAAS AGFCSPGCLD SKRVKGKIVL CDSPQNPDEA QAMGAIASIV 420
  421 RSHRTDVASI FSFPVSVLLE DDYNTVLSYM NSTKNPKAAV LKSETIFNQR APVVASYFSR 480
  481 GPNTIIPDIL KPDITAPGSE IVAAYSPDAP PSISDTRRVK YSVDTGTSMS CPHVAGVAAY 540
  541 LKSFHPRWSP SMIQSAIMTT AWPMNASTSP FNELAEFAYG AGHVDPITAI HPGLVYEANK 600
  601 SDHIAFLCGL NYTAKNLRLI SGDSSSCTKE QTKSLPRNLN YPSMTAQVSA AKPFKVIFRR 660
  661 TVTNVGRPNA TYKAKVVGSK LKVKVVPAVL SLKSLYEKKS FTVTASGAGP KAENLVSAQL 720
  721 IWSDGVHFVR SPIVVYATN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle