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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NDB4_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFHSFYQRA SSLFKAYPST SKILLLSTFS GGGGVLVYSD SNPLKRILHA DATLDSDGNP  60
   61 IRKKKVVVLG SGWSGYSFLS YLNNPNYDVQ VVSPRNFFLF TPLLPSVTNG TVEARSIVEP 120
  121 IRGLMRKKGF EYKEAECVKI DASNKKIHCR SKEGSSLKGT TEFDMDYDIL ILAVGAKPNT 180
  181 FNTPGVEEHA YFLKEAEDAL NIRHSVIDCF ERASLPNLTE EERKKILHFV VVGGGPTGVE 240
  241 FSAELHDFLV QDVAKIYPKV QEFTKITLLE AGDHILNMFD KRITAFAEEK FQRDGIDLKT 300
  301 GSMVVGVTAD EISTKERETG KIVSEPYGMV VWSTGIGSRP VIKDFMQQIG QGQRRVLATD 360
  361 EWLRVEGCDG VYALGDTATI NQRRVMEDIA AIFNKADKGN TGTLKKKDFN SVVKDICQRY 420
  421 PQVELYLKKN KLKNIANLLK SANGEDTQVN IEKFKQALSE VDSQMKNLPA TAQVASQQGK 480
  481 YLAKCFNKME KCEKKPEGPL RFRGEGRHRF QPFRYRHFGS FAPLGGEQTA AELPGDWVSI 540
  541 GHSSQWLWYS VYASKLVSWR TRMLVISDWT RRFVFGRDSS SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle