YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATCA3_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTIILFVTF LALSSSSLAD ETETEFHYKP GEIADPSKWS SIKAEWKICG TGKRQSPINL  60
   61 TPKIARIVHN STEILQTYYK PVEAILKNRG FDMKVKWEDD AGKIVINDTD YKLVQSHWHA 120
  121 PSEHFLDGQR LAMELHMVHK SVEGHLAVIG VLFREGEPNA FISRIMDKIH KIADVQDGEV 180
  181 SIGKIDPREF GWDLTKFYEY RGSLTTPPCT EDVMWTIINK VGTVSREQID VLTDARRGGY 240
  241 EKNARPAQPL NGRLVYLNEQ SSPSPTPRLR IPRVGPV

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	277	0.99