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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SERK2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP  60
   61 CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY LELYSNNITG PVPSDLGNLT 120
  121 NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL 180
  181 SGSVPDNGSF SLFTPISFAN NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT 240
  241 GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV 300
  301 ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR 360
  361 NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP LAWSIRQQIA LGSARGLSYL 420
  421 HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL 480
  481 STGKSSEKTD VFGYGIMLLE LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP 540
  541 DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE 600
  601 VELSSHPTSD WILDSTDNLH AMELSGPR

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