YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8844131, gi\|2...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNVLRNSNL TLAVLICFVL IASKLCSVDS SVYDPHKTLK QRFEKWLKTH SKLYGGRDEW  60
   61 MLRFGIYQSN VQLIDYINSL HLPFKLTDNR FADMTNSEFK AHFLGLNTSS LRLHKKQRPV 120
  121 CDPAGNVPDA VDWRTQGAVT PIRNQGKCGG CWAFSAVAAI EGINKIKTGN LVSLSEQQLI 180
  181 DCDVGTYNKG CSGGLMETAF EFIKTNGGLA TETDYPYTGI EGTCDQEKSK NKVVTIQGYQ 240
  241 KVAQNEASLQ IAAAQQPVSV GIDAGGFIFQ LYSSGVFTNY CGTNLNHGVT VVGYGVEGDQ 300
  301 KYWIVKNSWG TGWGEEGYIR MERGVSEDTG KCGIAMMASY PLQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	343	0.99