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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK56_ARATH
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSEVKVLQI VLVQWLTLFS FTYNSHGTYI LDGSAVFNEN SYLVLTNTTK HSYGQAFDNT  60
   61 TFEMKDQSFS INFFFAIVPE HKQQGSHGMT FAFSPTRGLP GASSDQYLGL FNKTNNGKTS 120
  121 NHVIAIELDI HKDEEFEDID DNHVGINING LRSVASASAG YYDDNDGSFK NLSLISGKLM 180
  181 RLSIVYSHPD TKLDVTLCPA EFLVPPRKPL LSLNRDLSQY VLKHMHIGFT ASTGSIRALH 240
  241 YMVLVYTYPE AVYQPLEFGR VPTLPPYPKK PSDRLRTVLA VCLTLALFAV FLASGIGFVF 300
  301 YLRHKKVKEV LEEWEIQCGP HRFSYKELFN ATKGFKEKQL LGKGGFGQVY KGTLPGSDAE 360
  361 IAVKRTSHDS RQGMSEFLAE ISTIGRLRHP NLVRLLGYCK HKENLYLVYD FMPNGSLDKY 420
  421 LNRSNTNENQ ERLTWEQRFK IIKDVASALL HLHQEWVQVI IHRDIKPANV LIDHDMNARL 480
  481 GDFGLAKLYD QGFDPQTSRV AGTFGYIAPE FLRTGRAVRV KFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle