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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BRL2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSPIRVRI RTRIQISFIF LLTHLSQSSS SDQSSLKTDS LSLLSFKTMI QDDPNNILSN  60
   61 WSPRKSPCQF SGVTCLGGRV TEINLSGSGL SGIVSFNAFT SLDSLSVLKL SENFFVLNST 120
  121 SLLLLPLTLT HLELSSSGLI GTLPENFFSK YSNLISITLS YNNFTGKLPN DLFLSSKKLQ 180
  181 TLDLSYNNIT GPISGLTIPL SSCVSMTYLD FSGNSISGYI SDSLINCTNL KSLNLSYNNF 240
  241 DGQIPKSFGE LKLLQSLDLS HNRLTGWIPP EIGDTCRSLQ NLRLSYNNFT GVIPESLSSC 300
  301 SWLQSLDLSN NNISGPFPNT ILRSFGSLQI LLLSNNLISG DFPTSISACK SLRIADFSSN 360
  361 RFSGVIPPDL CPGAASLEEL RLPDNLVTGE IPPAISQCSE LRTIDLSLNY LNGTIPPEIG 420
  421 NLQKLEQFIA WYNNIAGEIP PEIGKLQNLK DLILNNNQLT GEIPPEFFNC SNIEWVSFTS 480
  481 NRLTGEVPKD FGILSRLAVL QLGNNNFTGE IPPELGKCTT LVWLDLNTNH LTGEIPPRLG 540
  541 RQPGSKALSG LLSGNTMAFV RNVGNSCKGV GGLVEFSGIR PERLLQIPSL KSCDFTRMYS 600
  601 GPILSLFTRY QTIEYLDLSY NQLRGKIPDE IGEMIALQVL ELSHNQLSGE IPFTIGQLKN 660
  661 LGVFDASDNR LQGQIPESFS NLSFLVQIDL SNNELTGPIP QRGQLSTLPA TQYANNPGLC 720
  721 GVPLPECKNG NNQLPAGTEE GKRAKHGTRA ASWANSIVLG VLISAASVCI LIVWAIAVRA 780
  781 RRRDADDAKM LHSLQAVNSA TTWKIEKEKE PLSINVATFQ RQLRKLKFSQ LIEATNGFSA 840
  841 ASMIGHGGFG EVFKATLKDG SSVAIKKLIR LSCQGDREFM AEMETLGKIK HRNLVPLLGY 900
  901 CKIGEERLLV YEFMQYGSLE EVLHGPRTGE KRRILGWEER KKIAKGAAKG LCFLHHNCIP 960
  961 HIIHRDMKSS NVLLDQDMEA RVSDFGMARL ISALDTHLSV STLAGTPGYV PPEYYQSFRC1020
 1021 TAKGDVYSIG VVMLEILSGK RPTDKEEFGD TNLVGWSKMK AREGKHMEVI DEDLLKEGSS1080
 1081 ESLNEKEGFE GGVIVKEMLR YLEIALRCVD DFPSKRPNML QVVASLRELR GSENNSHSHS1140
 1141 NSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle