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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4432821, gi|2...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGHKGPNV RNFFKWQRGE SSSSLTTGLL HNESHEIELS NYGGIPSPGS ESPSGLLNGE  60
   61 SLNVQPIADL DLFVERLYSY YRDKGLWCII VKWAVELLSL GFIICFSGFF LLYVDWNGLQ 120
  121 NAKCGMDAVE SGTKPCDLVK EAIHPHPLSP FTLTTAIIVG YLALFSVYWL FCFLRFFAQL 180
  181 KDTLDFRHFY YNNLHVTDNE ILTMPWATVL EKVVQLQSSQ CLCVVKDLSA HDMVMRLMRK 240
  241 ENYLIGMLNK GLLSFPISHW IPGAGPAVKS APDGTQYHLV LTKTLEWTLN WCILQSMFDC 300
  301 NFRVRRDFVS NPTTLKKRLF VVGLAMLLLS PFLVIFMLVY LFLRHAEQFY NHPSTASSRR 360
  361 WSNLSKWLFR EFNEVDHLFK HRINSSVVHA SEYLKQFPSP IISIIAKFVS FVSGGFAAVL 420
  421 IIIAFLEESL LEGHIFGRNL FWYAAVFGTI TAISRAAISD ELLVLDPVGT MSLVVQNTHY 480
  481 MPKRWRGKEN KDDVRLELET LFQYTGMMLL EEIASIFITP FLLMFVVPKR VDDILQFIKD 540
  541 FTVDIEGVGH VCSFSAFYFE NHGNIKYGSP HNATRREQRS SQGKMEKSFL SFQSSYPSWE 600
  601 SDSLGKQFLS NLRTFRDRKL HEINTRHSSP SRAWRESTNT PALYRDIPRN PLASGNHTDS 660
  661 MWLIDPDQRN HPYLLDWYYT SQAHNRTDHP IERANEILTA NQNATDCWPP DLGIRGEDSR 720
  721 DLLNMEASTS GQFFRESILR HDQPEGEDSY GSQHPLDGRN QWWGRGNHSQ ISTAHPATTN 780
  781 SFIEPPDFIN RYTAGNLLDN SWSRRSIEEE DEEEEELDWE ENARRNLSRT TFMDDNDIEA 840
  841 GIDLHFDDVY SSRPQETSTS STTLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle