YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6041790
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEKQRKLLV LYASQTGNAL DAAERIGREA ERRGLPASVV STDEFDTEAV VFVVSTTGQG  60
   61 DSPDSFKAFW RFLLQRNLGN YWLQQVRYAV FGLGDSGYQK YNFVAKKLDK RLSDLGATTI 120
  121 IEKGLGDDQH PSGYEGTLDP WMLSLWRTLY QINPKYFPKG PDVKIPQDEV IDKPKYRILF 180
  181 HKQEKLEPKL LSDSDIIQRA RGMSPGKLFK DKSKPDCFLK MTRNEVLTKA ESTKDVRHFE 240
  241 FQFVSSTIEY EVGDVVELLP SQNSSVVDAF IERCGLDPES FITVGPRETE NSSFSEEMIT 300
  301 QIPIKLKTFV ELTMDVTSAS PRRYFFEIMS FYATAEHEKE RLQYFASPEG RDDLYNYNQK 360
  361 ERRSILEVLE DFPSVQIPFD WLVQLVPPLK PRAFSISSSP LAHPAAVHLT VSIVSWITPY 420
  421 KRTRKGLCSS WLASLAPEQE VNIPVWFHKG SLPAPSQSLP LILVGPGTGC APFRGFIAER 480
  481 AVQAQSSPVA PVMFFFGCRN KDTDFLYRDF WESHAREGGM LSEGKGGGFY TAFSRDQPKK 540
  541 VYVQHKIREM SKRVWDLLCD GAAVYVAGSS TKMPCDVMSA FEDIVSEETG GGSKEVASRW 600
  601 LKALEKTGRY NVEAWS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle