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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME43_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKYVLLGVT ALIMAMVICV EANDGNSPSR KMEEVHRESK LMITKTTVSI ICASTDYKQD  60
   61 CTTSLATVRS PDPRNLIRSA FDLAIISIRS GIDRGMIDLK SRADADMHTR EALNTCRELM 120
  121 DDAIDDLRKT RDKFRGFLFT RLSDFVEDLC VWLSGSITYQ QTCIDGFEGI DSEAAVMMER 180
  181 VMRKGQHLTS NGLAIAANLD KLLKAFRIPF PFLRSRRGRL GILGSGSSRD ESVGSSQDSP 240
  241 PNEDSSDDSP STVDSSENQP VDSSSENQSS DSSNNRPLDS SKNQQMESSE DTPKKSAFSG 300
  301 NQPLDDSSDK LPQKSTSSEN QPLDSSENPP QKSTSSENRP LDPLRKLNPL NKLDSLKDRH 360
  361 LSEEGEFPPW VTPHSRRLLA RRPRNNGIKA NVVVAKDGSG KCKTIAQALA MVPMKNTKKF 420
  421 VIHIKEGVYK EKVEVTKKML HVMFVGDGPT KTVITGDIAF LPDQVGTYRT ASVAVNGDYF 480
  481 MAKDIGFENT AGAARHQAVA LRVSADFAVF FNCHMNGYQD TLYVHTHRQF YRNCRVSGTI 540
  541 DFVFGDAKAV FQNCEFVIRR PMEHQQCIVT AQGRKDRRET TGIVIHNSRI TGDASYLPVK 600
  601 AKNRAFLGRP WKEFSRTIIM NTEIDDVIDP EGWLKWNETF ALNTLFYTEY RNRGRGSGQG 660
  661 RRVRWRGIKR ISDRAAREFA PGNFLRGNTW IPQTRIPYNA N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle