YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25316419, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYSSKKLFL FFLSCIMLTF NYNTSGFVAA ANSIGLNYGL LGDNFPTPSN VLNLYKSIGI  60
   61 TKIRIFDPKT EVLNALRGHR NIEVTVGVRD QDLGALSANE EAVKGWFATN IEPYLADVNI 120
  121 AFITVGNEVI PGPIGPQVLP VMQSLTILVK SMNLPISIST VVAMSNLEQS YPPSAGEFTS 180
  181 QAREQLVPVL KLLSQTSTPI LVNIYPYFPY ASDPTNIPLD YATFNTKATV VQDGPLGYSN 240
  241 MFDAIFDAFV WAMEKEGVKD LPMVVSETGW PSAGNGNLTT PDIAGTYNRN FVKHIVSGKG 300
  301 TPKRPNNGMD GFLFATFNEN QKPAGTDMKP IYKLF

Type	Start	End	Confidence
Signal Peptide	1	30	0.96
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	335	0.99