YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149243076, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNRLRSALA LVTGAGSGIG RAVSVRLAGE GATVAACDLD RAAAQETVRL LGGPGSKEGP  60
   61 PRGNHAAFQA DVSEARAARC LLEQVQACFS RPPSVVVSCA GITQDEFLLH MSEDDWDKVI 120
  121 AVNLKGTFLV TQAAAQALVS NGCRGSIINI SSIVGKVGNV GQTNYAASKA GVIGLTQTAA 180
  181 RELGRHGIRC NSVLPGFIAT PMTQKVPQKV VDKITEMIPM GHLGDPEDVA DVVAFLASED 240
  241 SGYITGTSVE VTGGLFMAEN LYFQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	264	0.99