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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25518386, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.11
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVPGYLRT CLDMGKIAFL AILVSTGIVL QILACALFNN WWPMLSVIMY VLLPMPLLFF  60
   61 GGSDSTSLFN ESDNSWINAA KFLTGASAVG SVAIPSILKH AGLIGWGALA LDLSSYVVFL 120
  121 VAILGYICIG DANKIPNYGS YRRGFSNEEA LILRRLSEGG LVHARHLLDK IPQRGSINRV 180
  181 VYWTSLLSKY AKTGYLDEAR VLFEVMPERN IVTCNAMLTG YVKCRRMNEA WTLFREMPKN 240
  241 VVSWTVMLTA LCDDGRSEDA VELFDEMPER NVVSWNTLVT GLIRNGDMEK AKQVFDAMPS 300
  301 RDVVSWNAMI KGYIENDGME EAKLLFGDMS EKNVVTWTSM VYGYCRYGDV REAYRLFCEM 360
  361 PERNIVSWTA MISGFAWNEL YREALMLFLE MKKDVDAVSP NGETLISLAY ACGGLGVEFR 420
  421 RLGEQLHAQV ISNGWETVDH DGRLAKSLVH MYASSGLIAS AQSLLNESFD LQSCNIIINR 480
  481 YLKNGDLERA ETLFERVKSL HDKVSWTSMI DGYLEAGDVS RAFGLFQKLH DKDGVTWTVM 540
  541 ISGLVQNELF AEAASLLSDM VRCGLKPLNS TYSVLLSSAG ATSNLDQGKH IHCVIAKTTA 600
  601 CYDPDLILQN SLVSMYAKCG AIEDAYEIFA KMVQKDTVSW NSMIMGLSHH GLADKALNLF 660
  661 KEMLDSGKKP NSVTFLGVLS ACSHSGLITR GLELFKAMKE TYSIQPGIDH YISMIDLLGR 720
  721 AGKLKEAEEF ISALPFTPDH TVYGALLGLC GLNWRDKDAE GIAERAAMRL LELDPVNAPG 780
  781 HVALCNVYAG LGRHDMEKEM RKEMGIKGVK KTPGCSWVVV NGRANVFLSG DKSASEAAQM 840
  841 VLPIFCGNEM LEEEEEKPLS LCHC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle