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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME64_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSPTLPHSI SASSSTPFAS AAVKPHRNKL LSRNGILIII AASCILLLLI SLLIYATVSK  60
   61 SSRNHHNPSH QTPTSDDHPP PETPPSPPPI AQIRLACNAT RFPDHCVASL SKPGQVPPDP 120
  121 KPVQIIHSAI SVSYENLKSG QSKIQSILDS SAGNRNRTNI ATICLEILSY SQHRTESTDI 180
  181 AVTSGDIKDA RAWMSAALAY QFDCWSGLKT VNDTKQVVDT ITFFEGLVNL TGNALSMMLS 240
  241 FDSFGDDVVS WIRPATERDG FWEKAGPSLG SGTGTEASLG FPSGLTEDVT VCKNGGKDCK 300
  301 YKTVQEAVDS APDTNRTVKF VIRIREGVYE ETVRVPFEKK NVVFIGDGMG KTVITGSLNV 360
  361 GQPGMTTFES ATVGVLGDGF MARDLTIENT AGADAHQAVA FRSDSDFSVL ENCEFLGNQD 420
  421 TLYAHSLRQF YKQCRIQGNV DFIFGNSAAV FQDCDILIAS KHSKLEQGGA NNAITAHGRI 480
  481 DASQSTGFVF LNCSINGTEE YMKEFQANPE GHKNFLGRPW KEFSRTVFVN CNLESLISPD 540
  541 GWMPWNGDFA LKTLYYGEYK NTGPGSVRSS RVPWSSEIPE KHVDVYSVAN FIQADEWAST 600
  601 TA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle